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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015943061.1_cds_XP_016486347.1_77194
CDS Infomation

[gene=LOC107806658] [db_xref=GeneID:107806658] [protein=E3 ubiquitin-protein ligase RGLG1-like isoform X4] [protein_id=XP_016486347.1] [location=join(194811..195053,195422..195506,195591..195731,195826..195939,196583..196680,196770..196849,196925..197030,198858..198985,199071..199197,199308..199364,200213..200236)] [gbkey=CDS]
Sequence

ATGGGGAATCAAGAGTCTGCCTTAAATGACGCTCACAGTGATTATTATCACCACAGCCCA
GAACATGTAAGAAATCAAATTGGCTCCAATCCTCAACATCAACCTACGACTTATGCAGAA
AGCTCCACGGATTCTAATTATCGAGCTCAAGTTACATCACATGACGGAGGATCAGATAGA
GCGAACTATCAAAGGAACCAGCAAGCCTCTTACATAGCTGATAACTATAACTCTTTGGAT
GAGGTTATTACCGCATTGCGAGAAGCAGGCCTTGAATCGTCAAACTTGATTCTTGGCATT
GATTTCACCAAAAGCAATGAGTGGGCAGGAAAACATTCATTCAACAGAAGAAGCCTCCAC
TCAGTTGGTCACACAGCTAACCCATACGAGCAAGCCATCTCTATAATTGGGCGAACTTTG
TCTCCTTTTGATGAGGACAACTTGATACCTTGTTTTGGATTTGGTGATGCAACCACACAC
GATCAGCATGTGTTTAGCTTTTACCCTGATCATCGCCCTTGCCATGGATTTGAGGAAGCT
CTTGCAAGATATAAGGAAATTCTTCCTTATCTGATATTATCAGGTCCAACTTCATTTGCC
CCAATAGTCAACACTGCAATAGATATAGTGGAAGCAAATAATGGGCAGTACCATGTCCTT
GTCATTGTTGCAGATGGACAGGTAACAAGGAGCACTGACACTCCATCTGGAAGCCTTAGC
CCTCAAGAACAGGCTACTGTAAATTCTATTGTTGCTGCTAGTGAATATCCTCTTTCAATT
ATTCTGGTCGGTGTTGGAGATGGCCCGTGGGATGAAATGCAACGGTTTGATGATAACATT
CCCCAACGGGCATTTGATAACTTCCAGTTCGTCAATTTTACAAAAATCATGTCTGAGCGT
TCAGCGAAGGAAAAGAAGGAAGCAACCTTTGCTCTTGCCGCACTCATGGAAATTCCAATT
CAGTACCGAGCCACTCAAAGGCTTCAATTCAGAGAAAGCAAAAGAGGCCCTCGTACAAGG
CCACTTCCTCCTCCTCGTGAAGTAATTGATCATGACAGTGCAGTCAAATCATTGCCGCAT
CCGACAAGCTATGAACCTGTTGACTCTGGAGCTGCAGAAAGAGATTGTCCCATTTGCTTG
ACAAACCCAAAGGACATGACTTTTGGATGTGGTCATCTGATTACCTACAGCTCTTACTCA
TGA

Peptide Sequence

PEP ID

XP_016486347.1
PEP Infomation

PREDICTED: E3 ubiquitin-protein ligase RGLG1-like isoform X4 [Nicotiana tabacum]
Sequence

MGNQESALNDAHSDYYHHSPEHVRNQIGSNPQHQPTTYAESSTDSNYRAQVTSHDGGSDR
ANYQRNQQASYIADNYNSLDEVITALREAGLESSNLILGIDFTKSNEWAGKHSFNRRSLH
SVGHTANPYEQAISIIGRTLSPFDEDNLIPCFGFGDATTHDQHVFSFYPDHRPCHGFEEA
LARYKEILPYLILSGPTSFAPIVNTAIDIVEANNGQYHVLVIVADGQVTRSTDTPSGSLS
PQEQATVNSIVAASEYPLSIILVGVGDGPWDEMQRFDDNIPQRAFDNFQFVNFTKIMSER
SAKEKKEATFALAALMEIPIQYRATQRLQFRESKRGPRTRPLPPPREVIDHDSAVKSLPH
PTSYEPVDSGAAERDCPICLTNPKDMTFGCGHLITYSSYS

Transcript Sequence

Gene sequence data has not been registered.